Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gm25406-201ENSMUST00000157599 105 ntBASIC11.1□□□□□ -0.63
PdfS4R2K0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PdfS4R2K0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PdfS4R2K0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PdfS4R2K0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
PdfS4R2K0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.09□□□□□ -0.63
PdfS4R2K0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
PdfS4R2K0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PdfS4R2K0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
PdfS4R2K0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm12497-201ENSMUST00000138778 237 ntBASIC11.08□□□□□ -0.64
PdfS4R2K0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm19164-201ENSMUST00000210667 640 ntBASIC11.08□□□□□ -0.64
PdfS4R2K0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms