Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb3S4R1G7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Gm8749-201ENSMUST00000117737 331 ntBASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Gm13464-201ENSMUST00000119418 935 ntBASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.02□□□□□ -0.33
H2afb3S4R1G7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb3S4R1G7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Mir5126-201ENSMUST00000175513 77 ntBASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Gm27300-201ENSMUST00000184085 97 ntBASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Gm27335-201ENSMUST00000184758 97 ntBASIC13.01□□□□□ -0.33
H2afb3S4R1G7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb3S4R1G7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13□□□□□ -0.33
H2afb3S4R1G7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H2afb3S4R1G7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2afb3S4R1G7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms