Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hdac6Q9Z2V5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hdac6Q9Z2V5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gm11524-201ENSMUST00000119349 807 ntBASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gm8652-201ENSMUST00000181363 964 ntBASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hdac6Q9Z2V5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm12928-201ENSMUST00000117115 573 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm14660-201ENSMUST00000119809 575 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Snora78-201ENSMUST00000158630 128 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac6Q9Z2V5 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.96■□□□□ 0.46
Hdac6Q9Z2V5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hdac6Q9Z2V5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gm8062-201ENSMUST00000139696 444 ntBASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gm37424-201ENSMUST00000191727 561 ntBASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms