Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcb1Q9Z0H3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcb1Q9Z0H3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcb1Q9Z0H3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gm15393-201ENSMUST00000120499 219 ntBASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcb1Q9Z0H3 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms