Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.26□□□□□ -0.61
CcsQ9WU84 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Gm7461-201ENSMUST00000058918 827 ntBASIC11.26□□□□□ -0.61
CcsQ9WU84 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.26□□□□□ -0.61
CcsQ9WU84 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.26□□□□□ -0.61
CcsQ9WU84 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Gm13884-201ENSMUST00000118103 829 ntBASIC11.25□□□□□ -0.61
CcsQ9WU84 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.25□□□□□ -0.61
CcsQ9WU84 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.25□□□□□ -0.61
CcsQ9WU84 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.25□□□□□ -0.61
CcsQ9WU84 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
CcsQ9WU84 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcsQ9WU84 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Gm18195-201ENSMUST00000207604 706 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 Gm9172-201ENSMUST00000212092 954 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 Mzt1-203ENSMUST00000227948 952 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.24□□□□□ -0.61
CcsQ9WU84 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.24□□□□□ -0.61
CcsQ9WU84 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms