Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Mir125a-201ENSMUST00000083545 68 ntBASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubd1Q9R1K7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gm24543-201ENSMUST00000103867 82 ntBASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gm25144-201ENSMUST00000179561 110 ntBASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gm25352-201ENSMUST00000179815 110 ntBASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tubd1Q9R1K7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Gm8584-201ENSMUST00000171982 758 ntBASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Gm27622-201ENSMUST00000183779 60 ntBASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Gm27533-201ENSMUST00000183800 152 ntBASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubd1Q9R1K7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubd1Q9R1K7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms