Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Mir1895-201ENSMUST00000122615 79 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm11025-201ENSMUST00000140773 466 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm23547-201ENSMUST00000158210 271 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.85□□□□□ -0.35
Nubp2Q9R061 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Chchd1-203ENSMUST00000224633 557 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nubp2Q9R061 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Carlr-201ENSMUST00000181515 2574 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Gm27494-201ENSMUST00000184735 189 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.84□□□□□ -0.35
Nubp2Q9R061 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nubp2Q9R061 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nubp2Q9R061 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.83□□□□□ -0.35
Nubp2Q9R061 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.83□□□□□ -0.35
Nubp2Q9R061 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.83□□□□□ -0.35
Nubp2Q9R061 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nubp2Q9R061 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.83□□□□□ -0.36
Nubp2Q9R061 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nubp2Q9R061 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms