Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.24□□□□□ -0.45
Six6Q9QZ28 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm21559-201ENSMUST00000220638 855 ntBASIC12.24□□□□□ -0.45
Six6Q9QZ28 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Gm8587-201ENSMUST00000076538 843 ntBASIC12.24□□□□□ -0.45
Six6Q9QZ28 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Six6Q9QZ28 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Six6Q9QZ28 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gm13168-201ENSMUST00000121771 632 ntBASIC12.22□□□□□ -0.45
Six6Q9QZ28 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms