Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm10154-201ENSMUST00000084445 354 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Mir8117-201ENSMUST00000184773 107 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Gm37935-201ENSMUST00000192012 982 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.03□□□□□ -0.32
Sec61a2Q9JLR1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a2Q9JLR1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms