Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ldb3Q9JKS4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ldb3Q9JKS4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Ldb3Q9JKS4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Gm9824-201ENSMUST00000178707 561 ntBASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Gm8396-201ENSMUST00000057361 823 ntBASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ldb3Q9JKS4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm29310-201ENSMUST00000185468 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21825-201ENSMUST00000185728 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm29109-201ENSMUST00000185895 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21896-201ENSMUST00000186520 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21873-201ENSMUST00000186728 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21794-201ENSMUST00000187056 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21880-201ENSMUST00000187275 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21826-201ENSMUST00000187451 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21198-201ENSMUST00000188393 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21749-201ENSMUST00000189343 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21901-201ENSMUST00000189568 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm29424-201ENSMUST00000189716 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm28599-201ENSMUST00000189838 694 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21867-201ENSMUST00000189917 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm29269-201ENSMUST00000190087 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21722-201ENSMUST00000190153 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm28423-201ENSMUST00000190701 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21899-201ENSMUST00000190745 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21910-201ENSMUST00000191163 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21849-201ENSMUST00000191571 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm28678-201ENSMUST00000191593 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm20910-201ENSMUST00000193268 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm21871-201ENSMUST00000194621 696 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm5312-201ENSMUST00000203728 547 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ldb3Q9JKS4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms