Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.12□□□□□ -0.15
Rrp8Q9DB85 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Gm18062-201ENSMUST00000208020 547 ntBASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Gm18055-201ENSMUST00000208254 547 ntBASIC14.12□□□□□ -0.15
Rrp8Q9DB85 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.12□□□□□ -0.15
Rrp8Q9DB85 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp8Q9DB85 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Gm15460-201ENSMUST00000118147 391 ntBASIC14.1□□□□□ -0.15
Rrp8Q9DB85 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp8Q9DB85 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms