Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm16476-201ENSMUST00000221544 139 ntBASIC18.99■□□□□ 0.63
U2af1Q9D883 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
U2af1Q9D883 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
U2af1Q9D883 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.99■□□□□ 0.63
U2af1Q9D883 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
U2af1Q9D883 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1Q9D883 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.98■□□□□ 0.63
U2af1Q9D883 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Gm44344-201ENSMUST00000200287 129 ntBASIC18.98■□□□□ 0.63
U2af1Q9D883 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
U2af1Q9D883 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1Q9D883 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.97■□□□□ 0.63
U2af1Q9D883 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.97■□□□□ 0.63
U2af1Q9D883 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Gm12428-201ENSMUST00000119844 727 ntBASIC18.97■□□□□ 0.63
U2af1Q9D883 Gm14767-201ENSMUST00000121559 586 ntBASIC18.97■□□□□ 0.63
U2af1Q9D883 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
U2af1Q9D883 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.97■□□□□ 0.63
U2af1Q9D883 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1Q9D883 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.97■□□□□ 0.63
U2af1Q9D883 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.96■□□□□ 0.63
U2af1Q9D883 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
U2af1Q9D883 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
U2af1Q9D883 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gm27989-201ENSMUST00000184721 107 ntBASIC18.96■□□□□ 0.63
U2af1Q9D883 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.96■□□□□ 0.63
U2af1Q9D883 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
U2af1Q9D883 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
U2af1Q9D883 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1Q9D883 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.95■□□□□ 0.62
U2af1Q9D883 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
U2af1Q9D883 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Gm9063-201ENSMUST00000223299 582 ntBASIC18.95■□□□□ 0.62
U2af1Q9D883 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms