Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bl1Q9D701 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Gm13836-201ENSMUST00000121159 501 ntBASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bl1Q9D701 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk3bl1Q9D701 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bl1Q9D701 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms