Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Gm25732-201ENSMUST00000175168 60 ntBASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Gm18584-201ENSMUST00000203098 964 ntBASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd1Q9D0E3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm11964-201ENSMUST00000120982 444 ntBASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm45219-201ENSMUST00000205602 465 ntBASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd1Q9D0E3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gm11222-201ENSMUST00000119005 738 ntBASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gm11597-201ENSMUST00000121423 964 ntBASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gm10275-202ENSMUST00000168697 495 ntBASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gm10275-201ENSMUST00000092620 635 ntBASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd1Q9D0E3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms