Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm2451-201ENSMUST00000199447 999 ntBASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm10290-201ENSMUST00000200451 999 ntBASIC15.06■□□□□ 0
Rnf135Q9CWS1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.06■□□□□ 0
Rnf135Q9CWS1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf135Q9CWS1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf135Q9CWS1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Gm14701-201ENSMUST00000117156 348 ntBASIC15.05■□□□□ -0
Rnf135Q9CWS1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rnf135Q9CWS1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.04■□□□□ -0
Rnf135Q9CWS1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.04■□□□□ -0
Rnf135Q9CWS1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Gm16198-201ENSMUST00000118766 670 ntBASIC15.04■□□□□ -0
Rnf135Q9CWS1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Olfr286-202ENSMUST00000205305 969 ntBASIC15.04■□□□□ -0
Rnf135Q9CWS1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf135Q9CWS1 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.04■□□□□ -0
Rnf135Q9CWS1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms