Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.64□□□□□ -0.07
Retreg3Q9CQV4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retreg3Q9CQV4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Gm2810-201ENSMUST00000118681 990 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Rprl2-201ENSMUST00000157150 290 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Gm44335-201ENSMUST00000196879 141 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Gm44297-201ENSMUST00000198304 141 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Gm44346-201ENSMUST00000198851 141 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 AC102542.1-201ENSMUST00000225204 1138 ntBASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retreg3Q9CQV4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Gm11543-201ENSMUST00000120758 370 ntBASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Mir7023-201ENSMUST00000185093 64 ntBASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retreg3Q9CQV4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms