Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nipsnap3bQ9CQE1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nipsnap3bQ9CQE1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Mir5126-201ENSMUST00000175513 77 ntBASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm2451-201ENSMUST00000199447 999 ntBASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm10290-201ENSMUST00000200451 999 ntBASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nipsnap3bQ9CQE1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms