Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Gm28659-201ENSMUST00000188013 759 ntBASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ska1Q9CPV1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Gm10060-201ENSMUST00000212002 111 ntBASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 AV026068-213ENSMUST00000223675 1171 ntBASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ska1Q9CPV1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Gm11452-201ENSMUST00000122376 690 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms