Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim11Q99PQ2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim11Q99PQ2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Gm15427-201ENSMUST00000117288 531 ntBASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim11Q99PQ2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim11Q99PQ2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trim11Q99PQ2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim11Q99PQ2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trim11Q99PQ2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.45■□□□□ 0.22
Trim11Q99PQ2 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Trim11Q99PQ2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms