Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf111Q99ML9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf111Q99ML9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf111Q99ML9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf111Q99ML9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14□□□□□ -0.17
Rnf111Q99ML9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm12260-201ENSMUST00000122447 411 ntBASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf111Q99ML9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14□□□□□ -0.17
Rnf111Q99ML9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms