Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gm28659-201ENSMUST00000188013 759 ntBASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkd1Q99MH6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.64□□□□□ -0.23
Nkd1Q99MH6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkd1Q99MH6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm13036-201ENSMUST00000117799 748 ntBASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Gm10819-201ENSMUST00000099988 561 ntBASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Nkd1Q99MH6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms