Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Gm25857-201ENSMUST00000082788 129 ntBASIC16.7■□□□□ 0.26
Smc1bQ920F6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smc1bQ920F6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc1bQ920F6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.69■□□□□ 0.26
Smc1bQ920F6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Gm14928-201ENSMUST00000120198 477 ntBASIC16.69■□□□□ 0.26
Smc1bQ920F6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc1bQ920F6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Efs-202ENSMUST00000227037 2540 ntBASIC16.68■□□□□ 0.26
Smc1bQ920F6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Gm7775-201ENSMUST00000218871 853 ntBASIC16.68■□□□□ 0.26
Smc1bQ920F6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc1bQ920F6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc1bQ920F6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Gm18766-201ENSMUST00000189811 808 ntBASIC16.67■□□□□ 0.26
Smc1bQ920F6 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.67■□□□□ 0.26
Smc1bQ920F6 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.67■□□□□ 0.26
Smc1bQ920F6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc1bQ920F6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms