Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx1Q91VR5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx1Q91VR5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx1Q91VR5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx1Q91VR5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Mir7684-201ENSMUST00000183858 60 ntBASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Gm18187-201ENSMUST00000196476 984 ntBASIC14.94□□□□□ -0.02
Ddx1Q91VR5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx1Q91VR5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Gm6973-201ENSMUST00000117080 721 ntBASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Gm27920-201ENSMUST00000183953 96 ntBASIC14.93□□□□□ -0.02
Ddx1Q91VR5 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx1Q91VR5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm28631-201ENSMUST00000190740 334 ntBASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Gm9182-201ENSMUST00000217829 639 ntBASIC14.92□□□□□ -0.02
Ddx1Q91VR5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx1Q91VR5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms