Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm5479-201ENSMUST00000160578 435 ntBASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gm27321-201ENSMUST00000185021 205 ntBASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Efs-202ENSMUST00000227037 2540 ntBASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm18766-201ENSMUST00000189811 808 ntBASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndc1Q8VCB1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ndc1Q8VCB1 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndc1Q8VCB1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Gm13464-201ENSMUST00000119418 935 ntBASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Gm12151-201ENSMUST00000121374 290 ntBASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Gm12134-201ENSMUST00000122109 520 ntBASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Gm6888-201ENSMUST00000221983 706 ntBASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms