Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Top1mtQ8R4U6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm13365-201ENSMUST00000121188 973 ntBASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Mir1895-201ENSMUST00000122615 79 ntBASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm10275-202ENSMUST00000168697 495 ntBASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm10275-201ENSMUST00000092620 635 ntBASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Top1mtQ8R4U6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Top1mtQ8R4U6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.27■□□□□ 0.35
Top1mtQ8R4U6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Top1mtQ8R4U6 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.27■□□□□ 0.35
Top1mtQ8R4U6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms