Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Gm11918-201ENSMUST00000121660 179 ntBASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Chmp7Q8R1T1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.42■□□□□ 0.54
Chmp7Q8R1T1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Gm15957-201ENSMUST00000118893 974 ntBASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp7Q8R1T1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms