Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Mir1895-201ENSMUST00000122615 79 ntBASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf7Q8R0S1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf7Q8R0S1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Atf7Q8R0S1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm13365-201ENSMUST00000121188 973 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm11594-201ENSMUST00000122313 162 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm18889-201ENSMUST00000174284 929 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm38225-201ENSMUST00000194001 393 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms