Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm10275-202ENSMUST00000168697 495 ntBASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm9824-201ENSMUST00000178707 561 ntBASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm10275-201ENSMUST00000092620 635 ntBASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtn1Q8K0T0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Gm5312-201ENSMUST00000203728 547 ntBASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Gm18049-201ENSMUST00000208909 581 ntBASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn1Q8K0T0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms