Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.25■□□□□ 0.19
Syne4Q8CII8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.25■□□□□ 0.19
Syne4Q8CII8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Gm13392-201ENSMUST00000117708 150 ntBASIC16.24■□□□□ 0.19
Syne4Q8CII8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.24■□□□□ 0.19
Syne4Q8CII8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne4Q8CII8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.23■□□□□ 0.19
Syne4Q8CII8 Gm45784-201ENSMUST00000188360 142 ntBASIC16.23■□□□□ 0.19
Syne4Q8CII8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.23■□□□□ 0.19
Syne4Q8CII8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne4Q8CII8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms