Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Brf1Q8CFK2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22065-201ENSMUST00000103753 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22066-201ENSMUST00000103761 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24932-201ENSMUST00000103763 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24115-201ENSMUST00000103799 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22190-201ENSMUST00000103827 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22191-201ENSMUST00000103831 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24721-201ENSMUST00000103849 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm28018-201ENSMUST00000103869 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm26399-201ENSMUST00000103937 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25349-201ENSMUST00000177728 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm23616-201ENSMUST00000177797 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25871-201ENSMUST00000177816 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24752-201ENSMUST00000178240 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24496-201ENSMUST00000178287 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25649-201ENSMUST00000178476 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25548-201ENSMUST00000178681 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm23147-201ENSMUST00000178841 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm26095-201ENSMUST00000179270 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22171-201ENSMUST00000179283 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm23936-201ENSMUST00000179354 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm22619-201ENSMUST00000179516 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25255-201ENSMUST00000179579 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24755-201ENSMUST00000179691 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm26506-201ENSMUST00000179692 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm25086-201ENSMUST00000179931 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm23243-201ENSMUST00000180047 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24659-201ENSMUST00000180212 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm24169-201ENSMUST00000180244 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm23689-201ENSMUST00000180354 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm27359-201ENSMUST00000184153 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm27785-201ENSMUST00000184268 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm27466-201ENSMUST00000184396 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm27703-201ENSMUST00000184836 110 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Brf1Q8CFK2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Gm10275-202ENSMUST00000168697 495 ntBASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Gm10275-201ENSMUST00000092620 635 ntBASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Brf1Q8CFK2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms