Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup88Q8CEC0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Gm43125-201ENSMUST00000201724 730 ntBASIC17.05■□□□□ 0.32
Nup88Q8CEC0 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup88Q8CEC0 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nup88Q8CEC0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms