Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.24■□□□□ 0.03
Uba3Q8C878 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.24■□□□□ 0.03
Uba3Q8C878 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Uba3Q8C878 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Uba3Q8C878 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba3Q8C878 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.23■□□□□ 0.03
Uba3Q8C878 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm23547-201ENSMUST00000158210 271 ntBASIC15.23■□□□□ 0.03
Uba3Q8C878 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm24158-201ENSMUST00000175263 71 ntBASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.23■□□□□ 0.03
Uba3Q8C878 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Gm5779-201ENSMUST00000218467 910 ntBASIC15.23■□□□□ 0.03
Uba3Q8C878 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.23■□□□□ 0.03
Uba3Q8C878 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Uba3Q8C878 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Uba3Q8C878 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Mir449b-201ENSMUST00000104833 80 ntBASIC15.22■□□□□ 0.03
Uba3Q8C878 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Gm7774-201ENSMUST00000200064 533 ntBASIC15.22■□□□□ 0.03
Uba3Q8C878 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Uba3Q8C878 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Uba3Q8C878 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Uba3Q8C878 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.21■□□□□ 0.03
Uba3Q8C878 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.21■□□□□ 0.03
Uba3Q8C878 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Gm9824-201ENSMUST00000178707 561 ntBASIC15.21■□□□□ 0.03
Uba3Q8C878 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Gm18049-201ENSMUST00000208909 581 ntBASIC15.21■□□□□ 0.03
Uba3Q8C878 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Uba3Q8C878 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Uba3Q8C878 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms