Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm29310-201ENSMUST00000185468 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21825-201ENSMUST00000185728 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm29109-201ENSMUST00000185895 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21896-201ENSMUST00000186520 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21873-201ENSMUST00000186728 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21794-201ENSMUST00000187056 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21880-201ENSMUST00000187275 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21826-201ENSMUST00000187451 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21198-201ENSMUST00000188393 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21749-201ENSMUST00000189343 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21901-201ENSMUST00000189568 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm29424-201ENSMUST00000189716 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm18766-201ENSMUST00000189811 808 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm28599-201ENSMUST00000189838 694 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21867-201ENSMUST00000189917 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm29269-201ENSMUST00000190087 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21722-201ENSMUST00000190153 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm28423-201ENSMUST00000190701 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21899-201ENSMUST00000190745 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21910-201ENSMUST00000191163 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21849-201ENSMUST00000191571 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm28678-201ENSMUST00000191593 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm20910-201ENSMUST00000193268 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm21871-201ENSMUST00000194621 696 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Gm10275-202ENSMUST00000168697 495 ntBASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Gm25948-201ENSMUST00000175334 112 ntBASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Gm10275-201ENSMUST00000092620 635 ntBASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc60Q8C4J0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc60Q8C4J0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms