Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Rprl2-201ENSMUST00000157150 290 ntBASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm27494-201ENSMUST00000184735 189 ntBASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trub1Q8C0D0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.9□□□□□ -0.02
Trub1Q8C0D0 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trub1Q8C0D0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gm13365-201ENSMUST00000121188 973 ntBASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gm11594-201ENSMUST00000122313 162 ntBASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms