Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf2Q8BZT2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Gm5745-201ENSMUST00000183748 313 ntBASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf2Q8BZT2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf2Q8BZT2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Gm11424-201ENSMUST00000121929 829 ntBASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms