Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trerf1Q8BXJ2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Gm27397-201ENSMUST00000184997 107 ntBASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trerf1Q8BXJ2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trerf1Q8BXJ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm6736-201ENSMUST00000166583 948 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm44492-201ENSMUST00000197012 141 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm43767-201ENSMUST00000198933 381 ntBASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trerf1Q8BXJ2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms