Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm27533-201ENSMUST00000183800 152 ntBASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup54Q8BTS4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup54Q8BTS4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gm16476-201ENSMUST00000221544 139 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gm6888-201ENSMUST00000221983 706 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Shd-206ENSMUST00000225145 998 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup54Q8BTS4 BC001981-202ENSMUST00000191393 1545 ntBASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.76□□□□□ -0.05
Nup54Q8BTS4 Gm12428-201ENSMUST00000119844 727 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms