Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Gm23547-201ENSMUST00000158210 271 ntBASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4Q8BQZ5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Chchd1-203ENSMUST00000224633 557 ntBASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4Q8BQZ5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpsf4Q8BQZ5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms