Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.2■□□□□ 0.82
Usp54Q8BL06 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Usp54Q8BL06 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Gm38671-201ENSMUST00000200573 130 ntBASIC20.19■□□□□ 0.82
Usp54Q8BL06 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp54Q8BL06 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Gm43118-201ENSMUST00000199149 775 ntBASIC20.18■□□□□ 0.82
Usp54Q8BL06 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.18■□□□□ 0.82
Usp54Q8BL06 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 AC073947.2-201ENSMUST00000215888 1130 ntBASIC20.18■□□□□ 0.82
Usp54Q8BL06 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp54Q8BL06 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm27331-201ENSMUST00000183705 60 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm5370-201ENSMUST00000187187 574 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm22018-201ENSMUST00000104357 131 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm15371-201ENSMUST00000117057 784 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm40466-201ENSMUST00000212174 422 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp54Q8BL06 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms