Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim50Q810I2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim50Q810I2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim50Q810I2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.09□□□□□ -0.15
Trim50Q810I2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.09□□□□□ -0.15
Trim50Q810I2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim50Q810I2 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.09□□□□□ -0.15
Trim50Q810I2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim50Q810I2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trim50Q810I2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim50Q810I2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim50Q810I2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Rprl2-201ENSMUST00000157150 290 ntBASIC14.08□□□□□ -0.16
Trim50Q810I2 Gm24513-201ENSMUST00000174964 138 ntBASIC14.08□□□□□ -0.16
Trim50Q810I2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Gm27397-201ENSMUST00000184997 107 ntBASIC14.08□□□□□ -0.16
Trim50Q810I2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.08□□□□□ -0.16
Trim50Q810I2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim50Q810I2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trim50Q810I2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim50Q810I2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Gm13365-201ENSMUST00000121188 973 ntBASIC14.07□□□□□ -0.16
Trim50Q810I2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim50Q810I2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim50Q810I2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Gm5867-201ENSMUST00000063197 592 ntBASIC14.07□□□□□ -0.16
Trim50Q810I2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.07□□□□□ -0.16
Trim50Q810I2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim50Q810I2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim50Q810I2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trim50Q810I2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim50Q810I2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms