Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm15321-201ENSMUST00000121290 288 ntBASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm23984-201ENSMUST00000157139 203 ntBASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm28630-201ENSMUST00000187806 498 ntBASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38bQ80SY5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm12134-201ENSMUST00000122109 520 ntBASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38bQ80SY5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Gm7775-201ENSMUST00000218871 853 ntBASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38bQ80SY5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms