Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Sybu-209ENSMUST00000228639 4113 ntBASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm12859-201ENSMUST00000117834 427 ntBASIC13.34□□□□□ -0.27
Pif1Q80SX8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm29667-201ENSMUST00000190817 490 ntBASIC13.34□□□□□ -0.27
Pif1Q80SX8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.34□□□□□ -0.27
Pif1Q80SX8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pif1Q80SX8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pif1Q80SX8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pif1Q80SX8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pif1Q80SX8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pif1Q80SX8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pif1Q80SX8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm14127-201ENSMUST00000117906 678 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm14928-201ENSMUST00000120198 477 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm29310-201ENSMUST00000185468 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21825-201ENSMUST00000185728 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm29109-201ENSMUST00000185895 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21896-201ENSMUST00000186520 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21873-201ENSMUST00000186728 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21794-201ENSMUST00000187056 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21880-201ENSMUST00000187275 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21826-201ENSMUST00000187451 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21198-201ENSMUST00000188393 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21749-201ENSMUST00000189343 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21901-201ENSMUST00000189568 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm29424-201ENSMUST00000189716 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm28599-201ENSMUST00000189838 694 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21867-201ENSMUST00000189917 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm29269-201ENSMUST00000190087 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21722-201ENSMUST00000190153 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm28423-201ENSMUST00000190701 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21899-201ENSMUST00000190745 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21910-201ENSMUST00000191163 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21849-201ENSMUST00000191571 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm28678-201ENSMUST00000191593 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm20910-201ENSMUST00000193268 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Gm21871-201ENSMUST00000194621 696 ntBASIC13.33□□□□□ -0.28
Pif1Q80SX8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pif1Q80SX8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms