Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtl1Q7M732 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Rtl1Q7M732 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtl1Q7M732 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Rtl1Q7M732 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtl1Q7M732 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Gm21451-201ENSMUST00000111062 2775 ntBASIC25.43■■□□□ 1.66
Rtl1Q7M732 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Rtl1Q7M732 AC159006.1-201ENSMUST00000226396 258 ntBASIC25.43■■□□□ 1.66
Rtl1Q7M732 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtl1Q7M732 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Gm37411-201ENSMUST00000194180 2282 ntBASIC25.42■■□□□ 1.66
Rtl1Q7M732 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtl1Q7M732 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 AC126549.2-201ENSMUST00000223997 1976 ntBASIC25.41■■□□□ 1.66
Rtl1Q7M732 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Rtl1Q7M732 Gm42690-201ENSMUST00000197921 1836 ntBASIC25.41■■□□□ 1.66
Rtl1Q7M732 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Gm37714-201ENSMUST00000194742 342 ntBASIC25.4■■□□□ 1.66
Rtl1Q7M732 CT030704.2-201ENSMUST00000228887 494 ntBASIC25.4■■□□□ 1.66
Rtl1Q7M732 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Gm28631-201ENSMUST00000190740 334 ntBASIC25.4■■□□□ 1.66
Rtl1Q7M732 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 AC139350.3-201ENSMUST00000226151 420 ntBASIC25.4■■□□□ 1.66
Rtl1Q7M732 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Mir497b-201ENSMUST00000093601 125 ntBASIC25.4■■□□□ 1.66
Rtl1Q7M732 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC25.4■■□□□ 1.66
Rtl1Q7M732 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rtl1Q7M732 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rtl1Q7M732 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Rtl1Q7M732 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rtl1Q7M732 Gm26513-201ENSMUST00000181802 2489 ntBASIC25.39■■□□□ 1.65
Rtl1Q7M732 Ldha-ps-201ENSMUST00000119390 995 ntBASIC25.39■■□□□ 1.65
Rtl1Q7M732 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC25.39■■□□□ 1.65
Rtl1Q7M732 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC25.39■■□□□ 1.65
Rtl1Q7M732 Gm18018-201ENSMUST00000198273 408 ntBASIC25.39■■□□□ 1.65
Rtl1Q7M732 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rtl1Q7M732 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rtl1Q7M732 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms