Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm6973-201ENSMUST00000117080 721 ntBASIC14.09□□□□□ -0.15
Scn4bQ7M729 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm27920-201ENSMUST00000183953 96 ntBASIC14.09□□□□□ -0.15
Scn4bQ7M729 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.09□□□□□ -0.15
Scn4bQ7M729 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn4bQ7M729 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn4bQ7M729 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn4bQ7M729 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Gm11025-201ENSMUST00000140773 466 ntBASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.08□□□□□ -0.16
Scn4bQ7M729 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.08□□□□□ -0.16
Scn4bQ7M729 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.08□□□□□ -0.16
Scn4bQ7M729 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn4bQ7M729 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gm14042-201ENSMUST00000120139 833 ntBASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gm2213-201ENSMUST00000197485 688 ntBASIC14.07□□□□□ -0.16
Scn4bQ7M729 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.07□□□□□ -0.16
Scn4bQ7M729 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms