Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm15487-201ENSMUST00000122373 465 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm5866-201ENSMUST00000177881 973 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm9229-201ENSMUST00000222777 126 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubfd1Q78JW9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubfd1Q78JW9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubfd1Q78JW9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms