Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.15□□□□□ -0.46
Rif1Q6PR54 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.15□□□□□ -0.46
Rif1Q6PR54 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.15□□□□□ -0.46
Rif1Q6PR54 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rif1Q6PR54 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Gm24990-201ENSMUST00000157406 323 ntBASIC12.15□□□□□ -0.47
Rif1Q6PR54 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.15□□□□□ -0.47
Rif1Q6PR54 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Rif1Q6PR54 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gm13786-201ENSMUST00000122371 333 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gm44126-201ENSMUST00000204831 514 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.14□□□□□ -0.47
Rif1Q6PR54 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rif1Q6PR54 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.13□□□□□ -0.47
Rif1Q6PR54 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms