Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup98Q6PFD9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup98Q6PFD9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm6244-201ENSMUST00000178732 841 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm8927-201ENSMUST00000181978 981 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm8598-201ENSMUST00000221184 836 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm3222-201ENSMUST00000071282 990 ntBASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nup98Q6PFD9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.76■□□□□ 0.27
Nup98Q6PFD9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup98Q6PFD9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm11803-201ENSMUST00000119966 444 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm15806-201ENSMUST00000120696 955 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm18062-201ENSMUST00000208020 547 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Gm18055-201ENSMUST00000208254 547 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup98Q6PFD9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup98Q6PFD9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms