Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Gm6152-201ENSMUST00000151704 340 ntBASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd4Q6PDQ2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Gm13392-201ENSMUST00000117708 150 ntBASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd4Q6PDQ2 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Gm8652-201ENSMUST00000181363 964 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Gm7287-201ENSMUST00000205267 602 ntBASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd4Q6PDQ2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Gm27731-201ENSMUST00000185192 107 ntBASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd4Q6PDQ2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.52■□□□□ 0.55
Chd4Q6PDQ2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm12928-201ENSMUST00000117115 573 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm15770-201ENSMUST00000117498 584 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm12957-201ENSMUST00000117835 377 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm37424-201ENSMUST00000191727 561 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms