Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Gm9726-201ENSMUST00000180321 678 ntBASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Gm10060-201ENSMUST00000212002 111 ntBASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Acot6-202ENSMUST00000222921 3622 ntBASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcd3Q6P9Z1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcd3Q6P9Z1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcd3Q6P9Z1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gm11452-201ENSMUST00000122376 690 ntBASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcd3Q6P9Z1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms