Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Gm14494-201ENSMUST00000118786 435 ntBASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Gm27920-201ENSMUST00000183953 96 ntBASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Sp140Q6NSQ5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Gm9182-201ENSMUST00000217829 639 ntBASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Gm10175-201ENSMUST00000086013 645 ntBASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sp140Q6NSQ5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sp140Q6NSQ5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Sp140Q6NSQ5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms